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    Architecture

    openBIS architecture is highly scalable and capable of storing and providing access to large volumes of data as a distributed storage. All raw data and result data are stored in the datastore, which is a managed flat-file system. openBIS utilizes a hybrid data repository, where the filesystem data store is augmented with a relational database management system for indexing information, metadata, and selected results. Access - ingress - to the service is provided through web browser as a reverse proxy. Basic openBIS deployment consists of two Java application servers - the Application Server (AS) and the Data Store Server (DSS). The AS manages the metadata and links to the data while the DSS manages the data itself.

    Deployment

    Schema A1 - openBIS deployment:

    stateDiagram-v2 direction LR [*] --> INGRESS INGRESS --> SERVERS SERVERS --> DATABASE state SERVERS { direction LR DSS --> AS AS --> DSS } SERVERS --> DATASTORE

    Schema A2 - openBIS connectivity:

    stateDiagram-v2 direction LR [*] --> 443/tcp: https 443/tcp --> SERVERS: https SERVERS --> 5432/tcp: sql state SERVERS { direction LR 8081/tcp --> 8080/tcp: api 8080/tcp --> 8081/tcp: api } SERVERS --> filesystem: io

    Schema A3 - openBIS containers:

    stateDiagram-v2 direction LR [*] --> ingress ingress --> app app --> db

    Database

    RDMS (postgres - 5432/tcp)

    Application Servers

    AS (java - 8080/tcp)

    DSS (java - 8081/tcp)

    Ingress

    INGRESS (haproxy - 443/tcp)

    Datastore

    Datastore

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